# academic-research-skills | Edward Cheng-I Wu | Knowledge Base | Instagit

Academic Research Skills for Claude Code: research → write → review → revise → finalize

GitHub Stars: 6.5k

Repository: https://github.com/Imbad0202/academic-research-skills

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## Articles

### [How to Provide Your Own Literature Corpus to the ARS Pipeline via the Material Passport](/Imbad0202/academic-research-skills/provide-literature-corpus-ars-pipeline-material-passport)

Learn how to provide your own literature corpus to the ARS pipeline using the Material Passport YAML. Inject custom data for enhanced research skills.

- Tags: how-to-guide
- Published: 2026-05-13

### [How to Resume Interrupted ARS Pipeline Sessions Using the Material Passport](/Imbad0202/academic-research-skills/resume-ars-pipeline-interrupted-session-material-passport)

Resume interrupted ARS pipeline sessions seamlessly using the Material Passport. Learn how this append-only ledger maintains your progress with cryptographic reset boundaries and simple validation.

- Tags: how-to-guide
- Published: 2026-05-13

### [How the Material Passport Flows Through ARS Pipeline Stages: A Complete Technical Guide](/Imbad0202/academic-research-skills/material-passport-flow-through-ars-pipeline)

Learn how the Material Passport flows through ARS pipeline stages. Discover its full journey and integrity checks in this complete technical guide. Understand its role from creation to verification.

- Tags: how-to-guide
- Published: 2026-05-13

### [Material Passport Schema: Core Fields in Academic Research Skills](/Imbad0202/academic-research-skills/material-passport-schema-core-fields)

Discover the core fields of the Material Passport schema, including origin_skill, origin_mode, and verification_status. Essential metadata for academic research artifacts.

- Tags: api-reference
- Published: 2026-05-13

### [What Is the Material Passport System in ARS? A Complete Technical Guide](/Imbad0202/academic-research-skills/ars-material-passport-system-purpose)

Explore the Material Passport system in ARS. This guide details how this metadata ledger tracks artifact provenance, verification, and audit history for Academic Research Skills. Unlock a complete technical overview.

- Tags: technical-guide
- Published: 2026-05-13

### [How to Initiate a Revision Process in the ARS Pipeline: 3 Steps Explained](/Imbad0202/academic-research-skills/initiate-ars-pipeline-revision-process)

Learn how to initiate a revision process in the ARS pipeline with our easy 3-step guide. Discover how to invoke slash commands and generate revised manuscripts efficiently.

- Tags: how-to-guide
- Published: 2026-05-13

### [How to Start the ARS Pipeline at a Specific Stage: Integrity Checking and Mid-Stream Execution](/Imbad0202/academic-research-skills/start-ars-pipeline-specific-stage-integrity)

Start the ARS pipeline at a specific stage like integrity checking using the run_codex_audit sh script and the --stage flag. Learn mid-stream execution for your academic research skills.

- Tags: how-to-guide
- Published: 2026-05-13

### [How to Install and Run the Full ARS Pipeline: Complete Setup Guide](/Imbad0202/academic-research-skills/how-to-install-run-ars-full-pipeline)

Install the full ARS pipeline using the Claude Code plugin or symlink. Follow this guide to launch the 10-stage academic research workflow and streamline your publication process.

- Tags: getting-started
- Published: 2026-05-13

### [What Reports Are Generated in the PROCESS SUMMARY Stage (Stage 6) of the ARS Pipeline?](/Imbad0202/academic-research-skills/ars-process-summary-stage-reports)

Discover the five key reports generated in the PROCESS SUMMARY stage of the ARS pipeline, including bilingual records, AI reflection metrics, and collaboration quality evaluations.

- Tags: internals
- Published: 2026-05-13

### [What Happens in the FINALIZE Stage (Stage 5) of the ARS Pipeline?](/Imbad0202/academic-research-skills/ars-finalize-stage-process)

Discover the FINALIZE stage of the ARS pipeline. Learn how this critical step converts manuscripts to publication-ready formats, ensuring accuracy and preparing your work for diverse outputs like Markdown, DOCX, LaTeX, or PDF.

- Tags: deep-dive
- Published: 2026-05-13

### [Final Integrity Stage (4.5) Explained: How It Differs from Pre-Review Integrity (Stage 2.5)](/Imbad0202/academic-research-skills/ars-final-integrity-stage-comparison)

Understand FINAL INTEGRITY stage 4.5 a mandatory post-revision audit differing from preliminary Stage 2.5. Ensure full RAISE compliance before publication.

- Tags: deep-dive
- Published: 2026-05-13

### [What Is the Function of the RE-REVIEW Stage (Stage 3') in the ARS Pipeline?](/Imbad0202/academic-research-skills/ars-re-review-stage-function)

Understand the RE-REVIEW stage (Stage 3') in the ARS pipeline. This crucial verification step ensures author revisions address comments and catch new issues before proceeding.

- Tags: deep-dive
- Published: 2026-05-13

### [How the REVISE Stage (Stage 4) Works in the ARS Academic Pipeline](/Imbad0202/academic-research-skills/ars-revise-stage-workflow)

Understand the REVISE stage in the ARS Academic Research Skills pipeline. Learn how structured loops and agent guidance improve manuscripts before final review.

- Tags: how-to-guide
- Published: 2026-05-13

### [What Happens During the Revision Coaching Sub-Stage (3→4) in the ARS Pipeline](/Imbad0202/academic-research-skills/ars-revision-coaching-sub-stage)

Understand revision coaching (3->4) in the ARS pipeline. Learn how this Socratic dialogue transforms editorial decisions into your revision strategy.

- Tags: internals
- Published: 2026-05-13

### [Typical Outputs of the REVIEW Stage in the ARS Pipeline](/Imbad0202/academic-research-skills/ars-review-stage-outputs)

Uncover the essential outputs of the REVIEW stage in the ARS pipeline. Discover editorial decisions, reviewer reports, revision roadmaps, and more to enhance your academic research skills.

- Tags: deep-dive
- Published: 2026-05-13

### [How the REVIEW Stage in the ARS Pipeline Operates: Architecture, Process, and Modes](/Imbad0202/academic-research-skills/ars-review-stage-operation-modes)

Explore the REVIEW stage in the ARS pipeline. Learn about its architecture, multi-phase peer review process, and six operational modes, including Sprint Contract enforcement and Editorial Decision Letters.

- Tags: deep-dive
- Published: 2026-05-13

### [What Checks Are Performed During the INTEGRITY Stage of the ARS Pipeline: The Complete 5-Phase Audit](/Imbad0202/academic-research-skills/ars-integrity-stage-checks)

Discover the crucial checks performed during the INTEGRITY stage of the ARS pipeline. This detailed audit ensures no fabricated sources, data errors, or plagiarism before peer review.

- Tags: deep-dive
- Published: 2026-05-13

### [What Is the INTEGRITY Stage (2.5) in the ARS Pipeline? Purpose and Implementation](/Imbad0202/academic-research-skills/ars-integrity-stage-purpose)

Discover the INTEGRITY stage 2.5 in the ARS pipeline. Learn how this crucial gate verifies references and citations, preventing fabricated content before peer review.

- Tags: deep-dive
- Published: 2026-05-13

### [WRITE Stage Modes in the ARS Pipeline: Plan vs Full Guide](/Imbad0202/academic-research-skills/ars-write-stage-modes)

Explore the two WRITE stage modes in the ARS pipeline: plan for iterative outlining and full for comprehensive draft generation. Master your academic writing process.

- Tags: deep-dive
- Published: 2026-05-13

### [How the WRITE Stage of the ARS Pipeline Functions: Inside the 12-Agent Paper Authoring System](/Imbad0202/academic-research-skills/ars-write-stage-function-agents)

Explore the WRITE stage of the ARS pipeline. Discover how 12 specialized agents transform research concepts into polished academic manuscripts in a coordinated workflow.

- Tags: deep-dive
- Published: 2026-05-13

### [What Outputs Are Generated During the RESEARCH Stage of the ARS Pipeline: 7 Critical Artifacts Explained](/Imbad0202/academic-research-skills/ars-research-stage-outputs)

Discover the 7 critical artifacts of the RESEARCH stage in the ARS pipeline, from RQ Brief to INSIGHT Collection. Build a solid foundation for academic writing.

- Tags: deep-dive
- Published: 2026-05-13

### [Modes for the RESEARCH Stage in the ARS Pipeline: The 7 Deep-Research Modes Explained](/Imbad0202/academic-research-skills/ars-research-stage-modes)

Explore the 7 deep-research modes in the ARS pipeline: full, quick, review, lit-review, fact-check, socratic, and systematic-review. Tailor your research output effectively.

- Tags: deep-dive
- Published: 2026-05-13

### [Agent Teams Involved in the RESEARCH Stage of the ARS Pipeline](/Imbad0202/academic-research-skills/ars-research-stage-agent-teams)

Discover the agent teams powering the RESEARCH stage of the ARS pipeline. Learn about the Deep-Research Skill Team and the Observer Team's roles in academic research skills.

- Tags: deep-dive
- Published: 2026-05-13

### [How the ARS Pipeline Is Structured: The 7 Main Stages Explained](/Imbad0202/academic-research-skills/ars-pipeline-structure-stages)

Understand the ARS pipeline structure with this explanation of its 7 main stages. Learn how Integrity checkpoints ensure artifact validation throughout the workflow.

- Tags: architecture
- Published: 2026-05-13